Tools & resources
TopoRoot
Method for computing hierarchy and fine-grained traits of maize roots from X-ray CT images [github]
3-D Root Crown Analysis Pipeline
Pipeline for segmentation of root crowns excavated from field and imaged using Xray CT [github]
Gia3D
Root3D skeleton trait extraction [github]
Root timeseries analysis
R scripts to analyze and visualize root traits over time from DynamicRoots-generated files [github]
